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lactobacillus spp  (ATCC)


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    Structured Review

    ATCC lactobacillus spp
    Lactobacillus Spp, supplied by ATCC, used in various techniques. Bioz Stars score: 96/100, based on 74 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/lactobacillus+spp/Lactobacillus+sp/pmc12604375-14-5-19
    Average 96 stars, based on 74 article reviews
    lactobacillus spp - by Bioz Stars, 2026-09
    96/100 stars

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    Related Articles

    other:

    Article Title: Treatment methods and compositions
    Article Snippet: In some of these embodiments, the Lactobacillus spp. can be L. acidophilus strain ATCC 4356.

    Article Title: Characterisation of Enterocins Produced by Antilisterial Enterococcus faecium BH04 , BH12 , BH84 , and BH99 and In Vitro/In Situ Inhibition of Listeria monocytogenes
    Article Snippet: On the other hand, other Lactobacillus spp. used for antibacterial spectrum, including Lactobacillus helveticus ATCC 15009 and Lactobacillus casei ATCC 393, were not affected by enterocins.

    Isolation:

    Article Title: Methods and compositions for bioprotection of potatoes from
    Article Snippet: .. In some embodiments, the compositions of treating Streptomyces scabies comprise a cell-free supernatant of a microbial culture inoculated with one or more isolated microorganism, wherein the microorganism comprises Aspergillus spp., for example, Aspergillus oryzae, IN-AOl, deposited Sep. 4, 2014 with ATCC, PTA-121551; Bacillus spp., for example, Bacillus amyloliquefaciens, IN-BS1, deposited Jan. 11, 2012 with ATCC, PTA-12385; Rhodopseudomonas spp., for example, Rhodopseudomonas palustris, IN-RP1, deposited Jan. 11, 2012 with ATCC, PTA-12387; Rhodopseudomonas palustris, IN-RP2, deposited Sep. 4, 2014 with ATCC, PTA-121533; Candida spp., for example, Candida utilis, IN-CU1, deposited Sep. 4, 2014 with ATCC, PTA-12550; Lactobacillus spp., for example, Lactobacillus helveticus, IN-LHI, deposited Jan. 11, 2012, with ATCC, PTA 12386; Lactobacillus rhamnosus, IN-LR1, deposited Sep. 4, 2014 with ATCC, PTA 121554; Lactobacillus paracasei, IN-LC1, deposited Sep. 4, 2014 with ATCC, PTA-121549; Lactobacillus plantarum, IN-LPl, deposited Sep. 4, 2014 with ATCC, PTA 121555; Lactococcus spp., for example, Lactococcus lactis, IN-LLl, deposited Sep. 4, 2014 with ATCC, PTA-121552; Pseudomonas spp., for example, Pseudomonas aeruginosa or Pseudomonas fluorescens; Saccharomyces spp., for example, Saccharomyces cerevisiae, IN-SC1, deposited on Jan. 11, 2012 with ATCC, PTA-12384; or Streptococcus spp., for example, Streptococcus lactis; or combinations thereof, or a microbial consortia comprising one or more of the above, for example, IN-M1, deposited Jan. 11, 2012 with ATCC, PTA-12383 and/or IN-M2, deposited Sep. 4, 2014 with ATCC, PTA-121556. .. IN-BS1, ATCC Deposit No. PTA-12385, was previously identified to be Bacillus subtilis in US Publication Nos.

    Activity Assay:

    Article Title: Novel antimicrobial strategy: native postbiotics synergize with antibiotics to overcome resistance in Klebsiella pneumoniae
    Article Snippet: .. In this study, 88 native Lactobacillus spp. isolates, were screened for antimicrobial activity against a highly resistant K. pneumoniae ATCC 7881 strain with a minimum inhibitory concentration ≥ 2048 μg/mL. ..

    Concentration Assay:

    Article Title: Novel antimicrobial strategy: native postbiotics synergize with antibiotics to overcome resistance in Klebsiella pneumoniae
    Article Snippet: .. In this study, 88 native Lactobacillus spp. isolates, were screened for antimicrobial activity against a highly resistant K. pneumoniae ATCC 7881 strain with a minimum inhibitory concentration ≥ 2048 μg/mL. ..

    Derivative Assay:

    Article Title: Strategies and Trends for Application Exopolysaccharides of Lactic Acid Bacteria in the Food and Biomedical
    Article Snippet: .. EPS-Ca6, derived from Lactobacillus spp., inhibits the growth of Micrococcus luteus and Salmonella enterica ATCC 43972. ..



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    Image Search Results


    Cervicovaginal microbiome profiles of 66 cytology samples. ( A ). The dot plot shows Lactobacillus abundance per sample. Clustering identified three Lactobacillus states: L. -dominant (CST I–III, V), L. -diminished (IV-A), and L. -depleted (IV-B) based on abundance levels. Mean values with 95% CI and red reference lines distinguish these states. ( B ). The stacked bar chart shows microbial composition (%) per sample, based on the proportion of mapped reads. Of 30 species identified by 16S sequencing, the top 17 are shown in the legend. For each sample, the V-region with the best species-level resolution is displayed. ( C ) The merged stacked bar chart shows microbial composition by CST, highlighting the dominant species within each group. ( D ) The Venn diagram compares species abundance across CST, using CST I as the reference. Unique species (n) in CST II–V appear in the arms of the diagram, with those showing an absolute fold change > 1.5 noted in parentheses. ( E ) The bar chart highlights the significant shift in species (n = 27) for CST IV-B compared to CST I, marked by an enrichment of facultative and/or anaerobic organisms (green bars) and depletion of L. crispatus , gasseri , and jensenii (gray bars).

    Journal: International Journal of Molecular Sciences

    Article Title: Cervicovaginal Microbiome and HPV: A Standardized Approach to 16S/ITS NGS and Microbial Community Profiling for Viral Association

    doi: 10.3390/ijms26168090

    Figure Lengend Snippet: Cervicovaginal microbiome profiles of 66 cytology samples. ( A ). The dot plot shows Lactobacillus abundance per sample. Clustering identified three Lactobacillus states: L. -dominant (CST I–III, V), L. -diminished (IV-A), and L. -depleted (IV-B) based on abundance levels. Mean values with 95% CI and red reference lines distinguish these states. ( B ). The stacked bar chart shows microbial composition (%) per sample, based on the proportion of mapped reads. Of 30 species identified by 16S sequencing, the top 17 are shown in the legend. For each sample, the V-region with the best species-level resolution is displayed. ( C ) The merged stacked bar chart shows microbial composition by CST, highlighting the dominant species within each group. ( D ) The Venn diagram compares species abundance across CST, using CST I as the reference. Unique species (n) in CST II–V appear in the arms of the diagram, with those showing an absolute fold change > 1.5 noted in parentheses. ( E ) The bar chart highlights the significant shift in species (n = 27) for CST IV-B compared to CST I, marked by an enrichment of facultative and/or anaerobic organisms (green bars) and depletion of L. crispatus , gasseri , and jensenii (gray bars).

    Article Snippet: For all the L. -diminished (CST IV-A) and L. -depleted (CST IV-B) samples, the dominant Lactobacillus spp. was L. iners , while the dominant opportunistic pathogen was G. vaginalis .

    Techniques: Sequencing

    Alignment of reads classified as “ Lactobacillus spp. unknown” to L. paragasseri and L. gasseri 16S rRNA genes. ( A ) Representative L. gasseri and L. paragasseri genomes show multiple 16S loci, with ambiguous reads mapping to expected locations. ( B ) In four samples containing ambiguous Lactobacillus spp. reads (30856-007; 30663-013, -034, -040), the V1V2 and V5V7 consensus sequences matched L. paragasseri (NR179257), distinguished from L. gasseri (NR975051) by SNPs at positions 101 (G/A) and 1052 (T/A), marked by red arrows.

    Journal: International Journal of Molecular Sciences

    Article Title: Cervicovaginal Microbiome and HPV: A Standardized Approach to 16S/ITS NGS and Microbial Community Profiling for Viral Association

    doi: 10.3390/ijms26168090

    Figure Lengend Snippet: Alignment of reads classified as “ Lactobacillus spp. unknown” to L. paragasseri and L. gasseri 16S rRNA genes. ( A ) Representative L. gasseri and L. paragasseri genomes show multiple 16S loci, with ambiguous reads mapping to expected locations. ( B ) In four samples containing ambiguous Lactobacillus spp. reads (30856-007; 30663-013, -034, -040), the V1V2 and V5V7 consensus sequences matched L. paragasseri (NR179257), distinguished from L. gasseri (NR975051) by SNPs at positions 101 (G/A) and 1052 (T/A), marked by red arrows.

    Article Snippet: For all the L. -diminished (CST IV-A) and L. -depleted (CST IV-B) samples, the dominant Lactobacillus spp. was L. iners , while the dominant opportunistic pathogen was G. vaginalis .

    Techniques:

    Diversity analysis of microbial species in liquid cytology samples by Community State Types (CST). ( A ) Simpson and Shannon rarefaction curves plateaued at 28,000 reads, indicating sufficient sampling depth across all 66 samples. ( B ) Boxplots summarize CST-grouped samples. Colored points represent individual samples. Species richness (Simpson’s index) and evenness (Shannon entropy) significantly increased from Lactobacillus -dominant (CST I–III, V) to L. -diminished and L. -depleted states (CST IV-A, IV-B). MWU: Mann–Whitney U test. ns, not significant.

    Journal: International Journal of Molecular Sciences

    Article Title: Cervicovaginal Microbiome and HPV: A Standardized Approach to 16S/ITS NGS and Microbial Community Profiling for Viral Association

    doi: 10.3390/ijms26168090

    Figure Lengend Snippet: Diversity analysis of microbial species in liquid cytology samples by Community State Types (CST). ( A ) Simpson and Shannon rarefaction curves plateaued at 28,000 reads, indicating sufficient sampling depth across all 66 samples. ( B ) Boxplots summarize CST-grouped samples. Colored points represent individual samples. Species richness (Simpson’s index) and evenness (Shannon entropy) significantly increased from Lactobacillus -dominant (CST I–III, V) to L. -diminished and L. -depleted states (CST IV-A, IV-B). MWU: Mann–Whitney U test. ns, not significant.

    Article Snippet: For all the L. -diminished (CST IV-A) and L. -depleted (CST IV-B) samples, the dominant Lactobacillus spp. was L. iners , while the dominant opportunistic pathogen was G. vaginalis .

    Techniques: Sampling, MANN-WHITNEY

    Clustered Heatmap of Microbial Abundance in Liquid Cytology Samples. ( A ) Two-way hierarchical clustering of 66 samples and microbial species reveals distinct CST patterns. L. iners formed the earliest clusters, with a shift toward a diverse, anaerobic community in CST IV-B. Lactobacillus species (blue overlay) cluster with CST I–III and V, while anaerobes (pink overlay) associate with CST IV-A and IV-B. Differences in species abundance are quantified using Pearson’s distance metric. ( B ) Aggregated heatmaps grouped by CST, HPV type/status and Pap smear diagnosis highlight distinct microbial signatures. Notably, the seven most abundant anaerobic pathogens (pink overlay) in CST IV-B (rectangular outline) are also enriched in HPV-16 positive and HSIL samples.

    Journal: International Journal of Molecular Sciences

    Article Title: Cervicovaginal Microbiome and HPV: A Standardized Approach to 16S/ITS NGS and Microbial Community Profiling for Viral Association

    doi: 10.3390/ijms26168090

    Figure Lengend Snippet: Clustered Heatmap of Microbial Abundance in Liquid Cytology Samples. ( A ) Two-way hierarchical clustering of 66 samples and microbial species reveals distinct CST patterns. L. iners formed the earliest clusters, with a shift toward a diverse, anaerobic community in CST IV-B. Lactobacillus species (blue overlay) cluster with CST I–III and V, while anaerobes (pink overlay) associate with CST IV-A and IV-B. Differences in species abundance are quantified using Pearson’s distance metric. ( B ) Aggregated heatmaps grouped by CST, HPV type/status and Pap smear diagnosis highlight distinct microbial signatures. Notably, the seven most abundant anaerobic pathogens (pink overlay) in CST IV-B (rectangular outline) are also enriched in HPV-16 positive and HSIL samples.

    Article Snippet: For all the L. -diminished (CST IV-A) and L. -depleted (CST IV-B) samples, the dominant Lactobacillus spp. was L. iners , while the dominant opportunistic pathogen was G. vaginalis .

    Techniques: Biomarker Discovery

    CLC Workflows, Tools, and Databases. ( A ) The Microbial Genomics Module offers workflows (blue arrow) and tools (black arrow) for taxonomic and diversity analysis ( left ), alongside the databases and dataset used in this study ( right ). ( B ) The Data QC and Taxonomic Profiling workflow uses the customized VAGIBIOTA or UNITE Reference Index (red outline) to generate QC reports and Abundance Tables from NGS reads obtained from clinical samples. These tables feed into the diversity analysis workflow. ( C ) Reads identified as “ Lactobacillus spp. unknown” are further analyzed using the Map Reads to Reference workflow which incorporates the VAGIBIOTA Sequence List for species identification ( left ). The Merge and Estimate Alpha and Beta Diversities workflow produces diversity plots and statistics ( right ).

    Journal: International Journal of Molecular Sciences

    Article Title: Cervicovaginal Microbiome and HPV: A Standardized Approach to 16S/ITS NGS and Microbial Community Profiling for Viral Association

    doi: 10.3390/ijms26168090

    Figure Lengend Snippet: CLC Workflows, Tools, and Databases. ( A ) The Microbial Genomics Module offers workflows (blue arrow) and tools (black arrow) for taxonomic and diversity analysis ( left ), alongside the databases and dataset used in this study ( right ). ( B ) The Data QC and Taxonomic Profiling workflow uses the customized VAGIBIOTA or UNITE Reference Index (red outline) to generate QC reports and Abundance Tables from NGS reads obtained from clinical samples. These tables feed into the diversity analysis workflow. ( C ) Reads identified as “ Lactobacillus spp. unknown” are further analyzed using the Map Reads to Reference workflow which incorporates the VAGIBIOTA Sequence List for species identification ( left ). The Merge and Estimate Alpha and Beta Diversities workflow produces diversity plots and statistics ( right ).

    Article Snippet: For all the L. -diminished (CST IV-A) and L. -depleted (CST IV-B) samples, the dominant Lactobacillus spp. was L. iners , while the dominant opportunistic pathogen was G. vaginalis .

    Techniques: Sequencing